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  5. OT_03G02410.1

OT_03G02410.1


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001064 (OrthoFinder) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G02410.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4375.3 4375.3 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010167 response to nitrate IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015706 nitrate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901698 response to nitrogen compound IEP Enrichment
BP GO:1901700 response to oxygen-containing compound IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 56 124
IPR000504 RRM_dom 151 212
No external refs found!