OT_03G01480.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002989 (OrthoFinder) Phylogenetic Tree(s): OG0002989_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G01480.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.47 tig00000571_g2200.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cre03.g156750 30786785, CCT5 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder
Cz14g22090.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.09 OrthoFinder
Dusal.0218s00013.1 33202716 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
EOD41457 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
PTI_12G03650.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Sro759_g198220.1 Contig608.g7522 Thermosome subunit beta (Fragment) 0.09 OrthoFinder
TP06G03230.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_1380 1380 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Vocar.0019s0089.1 32892724 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_002501277.1 MICPUN_93952, 93952 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01003958.1_cds_GFH28614.1_23091 HaLaN_27137, GFH28614 T-complex protein, epsilon subunit 0.04 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20561.1_5415 PRW20561 T-complex 1 subunit epsilon 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0038024 cargo receptor activity IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 40 531
No external refs found!