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  5. OT_02G04410.1

OT_02G04410.1


Description : Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal [Interproscan].


Gene families : OG_01_0003503 (OrthoFinder) Phylogenetic Tree(s): OG0003503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_02G04410.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000169.8 tig00000169_g11880.t1 No description available 0.03 OrthoFinder
Cre12.g556050 30792151, PRPL9 Protein biosynthesis.organelle translation... 0.21 OrthoFinder
Cz09g09260.t1 No alias Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.17 OrthoFinder
Dusal.0045s00015.1 33191647 Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.02 OrthoFinder
SymbC1.scaffold9245.1 9245.1 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.03 OrthoFinder
Vocar.0001s1112.1 32884313 Ribosomal protein L9, N-terminal; Ribosomal protein L9,... 0.03 OrthoFinder
XM_002505028.1 MICPUN_62813, 62813 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.27 OrthoFinder
XM_003060194.1 MicpuC2_59815, 59815 Ribosomal protein L9, C-terminal; Ribosomal protein L9,... 0.1 OrthoFinder
lcl|BLLF01000410.1_cds_GFH11513.1_5990 HaLaN_07021, GFH11513 Ribosomal_L9 domain-containing protein 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59565.1_6605 PRW59565 50S ribosomal L9 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020069 Ribosomal_L9_C 126 208
IPR020070 Ribosomal_L9_N 73 109
No external refs found!