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Description : Histone RNA hairpin-binding protein, RNA-binding domain [Interproscan].
Gene families : OG_01_0002232 (OrthoFinder) Phylogenetic Tree(s): OG0002232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_02G03060.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD13524 | No alias | Histone RNA hairpin-binding protein, RNA-binding domain... | 0.01 | OrthoFinder | |
| lcl|LHPG02000019.1_cds_PRW32578.1_3946 | PRW32578 | Oocyte-specific histone RNA stem-loop-binding 2 | 0.02 | OrthoFinder | |
| lcl|VRMN01000016.1_cds_KAA8491029.1_9786 | KAA8491029 | Histone RNA hairpin-binding protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Enrichment |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Enrichment |
| CC | GO:0000444 | MIS12/MIND type complex | IEP | Enrichment |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Enrichment |
| BP | GO:0000725 | recombinational repair | IEP | Enrichment |
| CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Enrichment |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016972 | thiol oxidase activity | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| CC | GO:0030008 | TRAPP complex | IEP | Enrichment |
| CC | GO:0030896 | checkpoint clamp complex | IEP | Enrichment |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Enrichment |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029344 | SLBP_RNA_bind | 122 | 190 |
| No external refs found! |