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  5. OT_02G02320.1

OT_02G02320.1


Description : Photosystem II PsbX [Interproscan].


Gene families : OG_01_0005201 (OrthoFinder) Phylogenetic Tree(s): OG0005201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_02G02320.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cz17g16010.t1 No alias Photosystem II PsbX [Interproscan]. 0.06 OrthoFinder
Vocar.0004s0497.1 32889840 Photosystem II PsbX [Interproscan]. 0.03 OrthoFinder
XM_002507802.1 MICPUN_108740, 108740 Photosystem II reaction center X (PSBX) 0.04 OrthoFinder
XM_003062149.1 MicpuC2_51772, 51772 Photosystem II PsbX protein, chloroplast precursor (PSBX) 0.03 OrthoFinder
lcl|BLLF01000783.1_cds_GFH14921.1_9398 HaLaN_11060, GFH14921 Photosystem II PsbX [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000865.1_cds_GFH15538.1_10015 HaLaN_11780, GFH15538 Photosystem II PsbX [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000971.1_cds_GFH16268.1_10745 HaLaN_12654, GFH16268 Photosystem II PsbX [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58336.1_7898 PRW58336 Photosystem II reaction center X 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 75 112
No external refs found!