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  5. OT_01G06180.1

OT_01G06180.1


Description : AMP-dependent synthetase/ligase; AMP-binding enzyme, C-terminal domain [Interproscan].


Gene families : OG_01_0000081 (OrthoFinder) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: OT_01G06180.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
EOD33481 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.01 OrthoFinder
Transcript_contig_54181 54181 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.02 OrthoFinder
Transcript_contig_58430 58430 AMP-dependent synthetase/ligase; AMP-binding enzyme,... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498817.1_7770 KAA8498817 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 26 401
IPR025110 AMP-bd_C 410 490
No external refs found!