1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_01G05940.1

OT_01G05940.1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001314 (OrthoFinder) Phylogenetic Tree(s): OG0001314_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G05940.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
XM_002500649.1 MICPUN_57322, 57322 COMPASS/Set1C complex protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016073 snRNA metabolic process IEP Enrichment
BP GO:0016180 snRNA processing IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0034472 snRNA 3'-end processing IEP Enrichment
BP GO:0034477 U6 snRNA 3'-end processing IEP Enrichment
BP GO:0043628 ncRNA 3'-end processing IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 227 265
IPR001680 WD40_repeat 96 132
IPR001680 WD40_repeat 50 88
IPR001680 WD40_repeat 11 44
No external refs found!