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  5. OT_01G05920.1

OT_01G05920.1


Description : Snf7 family [Interproscan].


Gene families : OG_01_0003320 (OrthoFinder) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G05920.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.72 tig00020554_g10852.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cre03.g188500 30787941, VPS46 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 OrthoFinder
Sro4183_g353300.1 Contig152.g1716 ESCRT-related protein 0.01 OrthoFinder
TP09G00550.1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
XM_002508689.1 MICPUN_109016, 109016 Snf7 family [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492750.1_2486 KAA8492750 Charged multivesicular body protein 1a 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 26 190
No external refs found!