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  5. OT_01G04960.1

OT_01G04960.1


Description : AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core; Peptidase M41 [Interproscan].


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G04960.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre09.g393950 30780473 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder
Cre12.g485800 30791981, FHL1 Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder
Cre17.g720050 30782442, FHL2 Protein degradation.peptidase families.metallopeptidase... 0.07 OrthoFinder
Cz02g25060.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.05 OrthoFinder
Cz03g27160.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.04 OrthoFinder
EOD07483 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.03 OrthoFinder
EOD15728 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.02 OrthoFinder
Transcript_contig_67520 67520 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.03 OrthoFinder
Vocar.0016s0146.1 32898067 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.06 OrthoFinder
XM_002505949.1 MICPUN_106506, 106506 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.06 OrthoFinder
XM_003062966.1 MicpuC2_29396, 29396 ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003298.1_cds_GFH26952.1_21429 HaLaN_25189, GFH26952 AAA domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33093.1_3571 PRW33093 Membrane AAA-metalloprotease 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 253 384
IPR000642 Peptidase_M41 467 655
IPR041569 AAA_lid_3 407 446
No external refs found!