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  5. OT_01G04930.1

OT_01G04930.1


Description : Cupin-like domain 8 [Interproscan].


Gene families : OG_01_0000146 (OrthoFinder) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G04930.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cre09.g407110 30780996 No description available 0.02 OrthoFinder
Cz16g13150.t1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
PTI_00G02900.1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
PTI_14G01340.1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78579 78579 Hypothetical protein 0.02 OrthoFinder
Vocar.0027s0018.1 32887149 Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR041667 Cupin_8 181 398
No external refs found!