OT_01G03370.1

Description : Zinc finger, RING-CH-type [Interproscan].

Gene families : OG_01_0000217 (OrthoFinder) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_01G03370.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method	Actions
EOD36868	No alias	Tetratricopeptide repeat; Zinc finger, RING-CH-type...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	87	136

External Links

No external refs found!