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  5. OT_01G03300.1

OT_01G03300.1


Description : Biotin carboxylase, C-terminal; Acetyl-CoA carboxylase, central domain; Acetyl-CoA carboxylase; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Biotin/lipoyl attachment; Biotin carboxylase-like, N-terminal domain [Interproscan].


Gene families : OG_01_0000506 (OrthoFinder) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G03300.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.17 tig00000350_g24318.t1 Enzyme classification.EC_6 ligases.EC_6.3 ligase forming... 0.02 OrthoFinder
EOD09730 No alias Biotin carboxylase, C-terminal [Interproscan]. 0.05 OrthoFinder
EOD32164 No alias Acetyl-CoA carboxylase [Ensembl]. 0.03 OrthoFinder
EOD35778 No alias Acetyl-CoA carboxylase [Ensembl]. 0.04 OrthoFinder
EOD35779 No alias Acetyl-CoA carboxylase [Ensembl]. 0.01 OrthoFinder
Sro1721_g293540.1 Contig2994.g23794 Acetyl-CoA carboxylase 1 0.03 OrthoFinder
Sro50_g029050.1 Contig297.g3893 Acetyl-CoA carboxylase 1 0.04 OrthoFinder
Sro9_g007250.1 Contig4120.g31493 Acetyl-CoA carboxylase 1 0.02 OrthoFinder
SymbC1.scaffold6029.2 6029.2 Acetyl-CoA carboxylase, central domain; Acetyl-CoA... 0.02 OrthoFinder
XM_002503730.1 MICPUN_104872, 104872 Acetyl-coa carboxylase 0.05 OrthoFinder
XM_002507048.1 MICPUN_113382, 113382 Acetyl-coa carboxylase 0.03 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8491002.1_6205 KAA8491002 Acetyl-CoA carboxylase 2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005481 BC-like_N 90 209
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 254 439
IPR034733 AcCoA_carboxyl 1489 2028
IPR005482 Biotin_COase_C 474 580
IPR013537 AcCoA_COase_cen 856 1379
IPR000089 Biotin_lipoyl 725 786
No external refs found!