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  5. OT_01G03000.1

OT_01G03000.1


Description : Trm112-like [Interproscan].


Gene families : OG_01_0003477 (OrthoFinder) Phylogenetic Tree(s): OG0003477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G03000.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021612.46 tig00021612_g22887.t1 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
Cre12.g512550 30792337 RNA processing.RNA modification.rRNA/tRNA... 0.05 OrthoFinder
Sro1600_g285060.1 Contig3444.g26792 Multifunctional methyltransferase subunit TRM112-like protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005651 Trm112-like 3 111
No external refs found!