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  5. OT_01G02940.1

OT_01G02940.1


Description : Bromodomain [Interproscan].


Gene families : OG_01_0000168 (OrthoFinder) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G02940.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001085.33 tig00001085_g6970.t1 Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Dusal.0083s00007.1 33186069 Bromodomain; NET domain [Interproscan]. 0.03 OrthoFinder
EOD26026 No alias Bromodomain; NET domain [Interproscan]. 0.01 OrthoFinder
Vocar.0040s0095.1 32886257 Bromodomain [Interproscan]. 0.02 OrthoFinder
XM_002504525.1 MICPUN_113985, 113985 Bromodomain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001487 Bromodomain 98 168
No external refs found!