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  5. OT_01G01930.1

OT_01G01930.1


Description : RNA recognition motif domain; Torus domain [Interproscan].


Gene families : OG_01_0005391 (OrthoFinder) Phylogenetic Tree(s): OG0005391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G01930.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold975.6 975.6 Torus domain; RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33097.1_3479 PRW33097 Pre-mRNA-splicing factor 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0008156 negative regulation of DNA replication IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Enrichment
BP GO:0048478 replication fork protection IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032297 Torus 58 171
IPR000504 RRM_dom 213 259
No external refs found!