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  5. OT_01G01310.1

OT_01G01310.1


Description : ABC transporter-like [Interproscan].


Gene families : OG_01_0001307 (OrthoFinder) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G01310.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre13.g580300 30783939 ABC transporter I family member 19 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cre17.g731050 30782523 ABC transporter I family member 20 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cz04g21110.t1 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
EOD32422 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
PTI_02G01230.1 No alias ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Sro2866_g338940.1 Contig1002.g10101 (ABC) transporter 0.03 OrthoFinder
Sro555_g165600.1 Contig677.g7908 Uncharacterized ABC transporter ATP-binding protein C20G4.01 0.03 OrthoFinder
SymbC1.scaffold3508.2 3508.2 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0091.1 32884469 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Vocar.0009s0036.1 32893484 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
XM_002506008.1 MICPUN_109515, 109515 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000320.1_cds_GFH10491.1_4968 HaLaN_05813, GFH10491 ABC transporter domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000494.1_cds_GFH12356.1_6833 HaLaN_08024, GFH12356 ABC transporter domain-containing protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 108 253
No external refs found!