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  5. OT_01G00400.1

OT_01G00400.1


Description : Proteasome component (PCI) domain; 26S proteasome regulatory subunit, C-terminal [Interproscan].


Gene families : OG_01_0003737 (OrthoFinder) Phylogenetic Tree(s): OG0003737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G00400.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.5 tig00020614_g12118.t1 Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder
Cre06.g275650 30779008, RPN3 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder
Cz09g24100.t1 No alias Proteasome component (PCI) domain; 26S proteasome... 0.03 OrthoFinder
PTI_01G05790.1 No alias 26S proteasome regulatory subunit, C-terminal;... 0.07 OrthoFinder
Sro229_g093060.1 Contig429.g5810 Probable 26S proteasome non-ATPase regulatory subunit 3 0.08 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495167.1_3697 KAA8495167 26S proteasome non-ATPase regulatory subunit 3 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEA Interproscan
MF GO:0030234 enzyme regulator activity IEA Interproscan
BP GO:0042176 regulation of protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR013586 26S_Psome_reg_C 422 486
IPR000717 PCI_dom 316 418
No external refs found!