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  5. XM_003064603.1

XM_003064603.1 (MicpuC2_43587, 43587)


Aliases : MicpuC2_43587, 43587

Description : Condensin complex component


Gene families : OG_01_0002043 (OrthoFinder) Phylogenetic Tree(s): OG0002043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003064603.1
Cluster HCCA: Cluster_5

Cluster_43 vs Cluster_73 graph comparison
Target Alias Description ECC score Gene Family Method Actions
Cre02.g086650 30785243, SMC2 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz10g09260.t1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
EOD10000No alias SMCs flexible hinge; RecF/RecN/SMC, N-terminal [Interproscan]. 0.04 OrthoFinder
OT_04G00570.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.04 OrthoFinder
PTI_22G01140.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
Sro864_g212600.1 Contig2395.g19632 Mitotic chromosome and X-chromosome-associated protein mix-1 0.02 OrthoFinder
TP01G05320.1 No alias RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0431.1 32890001 SMCs flexible hinge; RecF/RecN/SMC, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_002504700.1 MICPUN_97912, 97912 Condensin complex component 0.06 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61562.1_554 PRW61562 Structural maintenance of chromosomes 2-1 isoform B 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61563.1_555 PRW61563 Structural maintenance of chromosomes 2-1 isoform A 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497009.1_738 KAA8497009 Structural maintenance of chromosomes protein 2-1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 55 976
IPR010935 SMC_hinge 401 464
No external refs found!