1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003064300.1

XM_003064300.1 (MicpuC2_37015, 37015)


Aliases : MicpuC2_37015, 37015

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001699 (OrthoFinder) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003064300.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000010.1_cds_PRW50946.1_846 PRW50946 Oligouridylate-binding 1-like 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493464.1_4226 KAA8493464 Polyadenylate-binding protein RBP47C' 0.01 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493603.1_4365 KAA8493603 Polyadenylate-binding protein RBP47C' 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 115 185
IPR000504 RRM_dom 15 81
IPR000504 RRM_dom 231 293
No external refs found!