- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MicpuC2_53785, 53785
Description : Highly cold-shock DNA binding protein
Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003064085.1 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000169.17 | tig00000169_g11886.t1 | External stimuli response.temperature.Csd... | 0.03 | OrthoFinder | |
| SymbC1.scaffold1576.4 | 1576.4 | Cold-shock protein, DNA-binding; RNA recognition motif... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0004514 | nicotinate-nucleotide diphosphorylase (carboxylating) activity | IEP | Enrichment |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
| MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Enrichment |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Enrichment |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
| CC | GO:0072546 | EMC complex | IEP | Enrichment |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002059 | CSP_DNA-bd | 84 | 138 |
| No external refs found! |