XM_003064073.1 (MicpuC2_23171, 23171)

Aliases : MicpuC2_23171, 23171

Description : Uroporphyrinogen decarboxylase chloroplast precursor (HEME2)

Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003064073.1
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021319.48	tig00021319_g20242.t1	Coenzyme metabolism.tetrapyrrol...	0.06	OrthoFinder
Cre02.g073700	30785831, UPD3	Coenzyme metabolism.tetrapyrrol...	0.09	OrthoFinder
Cre02.g076300	30785008, UPD2	Coenzyme metabolism.tetrapyrrol...	0.08	OrthoFinder
Cre11.g467700	30776050, UPD1	Coenzyme metabolism.tetrapyrrol...	0.09	OrthoFinder
Cz14g23190.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.08	OrthoFinder
Cz16g13070.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.11	OrthoFinder
Dusal.0040s00025.1	33197281	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
Dusal.0096s00026.1	33195840	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
Dusal.0437s00004.1	33198273	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.01	OrthoFinder
EOD39324	No alias	Uroporphyrinogen decarboxylase [Ensembl].	0.06	OrthoFinder
OT_01G03410.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.15	OrthoFinder
OT_12G02430.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.1	OrthoFinder
OT_17G00160.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.1	OrthoFinder
PTI_04G05280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.07	OrthoFinder
PTI_10G00460.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.07	OrthoFinder
Sro1503_g278020.1	Contig1159.g11075	Uroporphyrinogen decarboxylase	0.06	OrthoFinder
Sro350_g123690.1	Contig1556.g14139	Uroporphyrinogen decarboxylase	0.05	OrthoFinder
Sro80_g043120.1	Contig92.g1056	Uroporphyrinogen decarboxylase	0.06	OrthoFinder
TP02G01280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.09	OrthoFinder
TP03G09170.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.07	OrthoFinder
Transcript_contig_59670	59670	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.02	OrthoFinder
Transcript_contig_89604	89604	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.02	OrthoFinder
Vocar.0012s0224.1	32894830	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.06	OrthoFinder
Vocar.0056s0027.1	32896685	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
XM_002508574.1	MICPUN_104963, 104963	Uroporphyrinogen decarboxylase chloroplast precursor (HEME2)	0.09	OrthoFinder
lcl\|BLLF01000412.1_cds_GFH11531.1_6008	HaLaN_07044, GFH11531	Uroporphyrinogen decarboxylase	0.03	OrthoFinder
lcl\|BLLF01000728.1_cds_GFH14454.1_8931	HaLaN_10514, GFH14454	Uroporphyrinogen decarboxylase	0.1	OrthoFinder
lcl\|BLLF01001154.1_cds_GFH17479.1_11956	HaLaN_14128, GFH17479	Uroporphyrinogen decarboxylase	0.01	OrthoFinder
lcl\|LHPG02000011.1_cds_PRW45352.1_1514	PRW45352	Uroporphyrinogen decarboxylase chloroplast precursor	0.06	OrthoFinder
lcl\|LHPG02000026.1_cds_PRW18323.1_5795	PRW18323	Uroporphyrinogen decarboxylase	0.07	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497188.1_917	KAA8497188	Uroporphyrinogen decarboxylase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
MF	GO:0008483	transaminase activity	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Enrichment
CC	GO:0009507	chloroplast	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009523	photosystem II	IEP	Enrichment
CC	GO:0009536	plastid	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Enrichment
BP	GO:0010109	regulation of photosynthesis	IEP	Enrichment
BP	GO:0010207	photosystem II assembly	IEP	Enrichment
MF	GO:0010242	oxygen evolving activity	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Enrichment
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
BP	GO:0019684	photosynthesis, light reaction	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Enrichment
BP	GO:0042549	photosystem II stabilization	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	16	339

External Links

No external refs found!

XM_003064073.1 (MicpuC2_23171, 23171)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation