- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MicpuC2_66433, 66433
Description : Putative 5-3 exonuclease [Interproscan].
Gene families : OG_01_0002196 (OrthoFinder) Phylogenetic Tree(s): OG0002196_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003064064.1 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_17G02340.1 | No alias | Putative 5-3 exonuclease [Interproscan]. | 0.03 | OrthoFinder | |
| Sro249_g098610.1 | Contig4691.g34865 | 5'-3' exoribonuclease 2 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004527 | exonuclease activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| BP | GO:0006536 | glutamate metabolic process | IEP | Enrichment |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Enrichment |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| MF | GO:0015930 | glutamate synthase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004859 | Put_53exo | 75 | 313 |
| No external refs found! |