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  5. XM_003064004.1

XM_003064004.1 (MicpuC2_66337, 66337)


Aliases : MicpuC2_66337, 66337

Description : Plant specific eukaryotic initiation factor 4B [Interproscan].


Gene families : OG_01_0006466 (OrthoFinder) Phylogenetic Tree(s): OG0006466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003064004.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cz07g14120.t1 No alias Plant specific eukaryotic initiation factor 4B [Interproscan]. 0.03 OrthoFinder
Dusal.0358s00011.1 33203386 Plant specific eukaryotic initiation factor 4B [Interproscan]. 0.06 OrthoFinder
OT_17G02210.1 No alias Plant specific eukaryotic initiation factor 4B [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000112.1_cds_GFH07730.1_2207 HaLaN_02572, GFH07730 Plant specific eukaryotic initiation factor 4B [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000701.1_cds_GFH14211.1_8688 HaLaN_10226, GFH14211 Plant specific eukaryotic initiation factor 4B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
InterPro domains Description Start Stop
IPR010433 EIF-4B_pln 73 171
No external refs found!