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  5. XM_003063963.1

XM_003063963.1 (MicpuC2_23408, 23408)


Aliases : MicpuC2_23408, 23408

Description : YchF, C-terminal domain; GTP binding domain [Interproscan].


Gene families : OG_01_0001762 (OrthoFinder) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063963.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cz13g15080.t1 No alias YchF, C-terminal domain; GTP binding domain [Interproscan]. 0.05 OrthoFinder
Dusal.0728s00007.1 33192611 GTP binding domain [Interproscan]. 0.03 OrthoFinder
EOD40148 No alias GTP binding domain; YchF, C-terminal domain [Interproscan]. 0.05 OrthoFinder
OT_17G00600.1 No alias YchF, C-terminal domain; GTP binding domain [Interproscan]. 0.03 OrthoFinder
PTI_23G01370.1 No alias YchF, C-terminal domain; GTP binding domain [Interproscan]. 0.02 OrthoFinder
Sro299_g111460.1 Contig1218.g11448 Obg-like ATPase 1 0.03 OrthoFinder
XM_002502208.1 MICPUN_81961, 81961 GTP binding domain; YchF, C-terminal domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001607.1_cds_GFH20274.1_14751 HaLaN_17366, GFH20274 Obg-like ATPase 1 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498002.1_6955 KAA8498002 Obg-like ATPase 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 25 131
IPR013029 YchF_C 310 393
No external refs found!