XM_003063893.1 (MicpuC2_30088, 30088)

Aliases : MicpuC2_30088, 30088

Description : ATP-dependent helicase, C-terminal; DEAD2 [Interproscan].

Gene families : OG_01_0000361 (OrthoFinder) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003063893.1
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g089608	30785132	Regulator of telomere elongation helicase 1 homolog...	0.02	OrthoFinder
Cre09.g397350	30781526	Regulator of telomere elongation helicase 1 homolog...	0.04	OrthoFinder
Cz02g00030.t1	No alias	ATP-dependent helicase, C-terminal; DEAD2 [Interproscan].	0.05	OrthoFinder
OT_04G00710.1	No alias	ATP-dependent helicase, C-terminal; DNA polymerase...	0.05	OrthoFinder
OT_16G01260.1	No alias	ATP-dependent helicase, C-terminal; DEAD2 [Interproscan].	0.03	OrthoFinder
Sro1149_g246570.1	Contig1585.g14401	Regulator of telomere elongation helicase 1	0.02	OrthoFinder
Sro13_g010240.1	Contig337.g4565	Helicase CHL1	0.02	OrthoFinder
Transcript_contig_78575	78575	DEAD2 [Interproscan].	0.01	OrthoFinder
Vocar.0021s0177.1	32895947	ATP-dependent helicase, C-terminal; DEAD2 [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000023.1_cds_PRW20458.1_5459	PRW20458	Putative ATP-dependent RNA helicase DDX11	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEA	Interproscan
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Enrichment
BP	GO:0000077	DNA damage checkpoint signaling	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0003697	single-stranded DNA binding	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0006631	fatty acid metabolic process	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
MF	GO:0008144	drug binding	IEP	Enrichment
BP	GO:0008272	sulfate transport	IEP	Enrichment
MF	GO:0008658	penicillin binding	IEP	Enrichment
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Enrichment
BP	GO:0009166	nucleotide catabolic process	IEP	Enrichment
BP	GO:0010564	regulation of cell cycle process	IEP	Enrichment
BP	GO:0010948	negative regulation of cell cycle process	IEP	Enrichment
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
BP	GO:0016559	peroxisome fission	IEP	Enrichment
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016790	thiolester hydrolase activity	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
CC	GO:0030896	checkpoint clamp complex	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
MF	GO:0031406	carboxylic acid binding	IEP	Enrichment
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Enrichment
BP	GO:0032954	regulation of cytokinetic process	IEP	Enrichment
BP	GO:0032955	regulation of division septum assembly	IEP	Enrichment
MF	GO:0033293	monocarboxylic acid binding	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
BP	GO:0042770	signal transduction in response to DNA damage	IEP	Enrichment
MF	GO:0043177	organic acid binding	IEP	Enrichment
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Enrichment
BP	GO:0044248	cellular catabolic process	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
BP	GO:0045786	negative regulation of cell cycle	IEP	Enrichment
BP	GO:0046434	organophosphate catabolic process	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
BP	GO:0048285	organelle fission	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Enrichment
BP	GO:0072348	sulfur compound transport	IEP	Enrichment
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Enrichment
BP	GO:1901891	regulation of cell septum assembly	IEP	Enrichment
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Enrichment
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006555	ATP-dep_Helicase_C	580	768
IPR010614	DEAD_2	118	310

External Links

No external refs found!

XM_003063893.1 (MicpuC2_30088, 30088)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation