XM_003063805.1 (MicpuC2_48994, 48994)

Aliases : MicpuC2_48994, 48994

Description : Photosystem II manganese-stabilizing polypeptide (PSBO)

Gene families : OG_01_0001803 (OrthoFinder) Phylogenetic Tree(s): OG0001803_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003063805.1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020911.42	tig00020911_g15745.t1	Oxygen-evolving enhancer protein 1, chloroplastic...	0.04	OrthoFinder
Cpa\|evm.model.tig00020911.43	tig00020911_g15745.t1	Oxygen-evolving enhancer protein 1, chloroplastic...	0.02	OrthoFinder
Cpa\|evm.model.tig00020944.21	tig00020944_g16367.t1	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.02	OrthoFinder
Cre09.g396213	30780284, PSBO	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.07	OrthoFinder
Cz16g19040.t1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.1	OrthoFinder
Dusal.0128s00011.1	33185282	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.03	OrthoFinder
OT_14G00180.1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.11	OrthoFinder
PTI_08G03550.1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder
Sro852_g211010.1	Contig107.g1243	Enhancer protein 1, chloroplastic	0.02	OrthoFinder
TP06G06720.1	No alias	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.02	OrthoFinder
Transcript_contig_58678	58678	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.01	OrthoFinder
Vocar.0009s0198.1	32893184	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.06	OrthoFinder
XM_002505763.1	MICPUN_92317, 92317	Photosystem II manganese-stabilizing polypeptide (PSBO)	0.08	OrthoFinder
lcl\|BLLF01004367.1_cds_GFH29477.1_23954	HaLaN_28140, GFH29477	Photosystem II PsbO, manganese-stabilising [Interproscan].	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0010207	photosystem II assembly	IEA	Interproscan
MF	GO:0010242	oxygen evolving activity	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	Interproscan
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Enrichment
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Enrichment
MF	GO:0005506	iron ion binding	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Enrichment
CC	GO:0009507	chloroplast	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009523	photosystem II	IEP	Enrichment
CC	GO:0009536	plastid	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
BP	GO:0019684	photosynthesis, light reaction	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002628	PSII_MSP	72	302

External Links

No external refs found!

XM_003063805.1 (MicpuC2_48994, 48994)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation