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  5. Cpa|evm.model.tig00000194.49

Cpa|evm.model.tig00000194.49 (tig00000194_g14777.t1)


Aliases : tig00000194_g14777.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component


Gene families : OG_01_0002830 (OrthoFinder) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.49
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre14.g621450 30776682, RPL5 Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder
Cz10g29210.t1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.13 OrthoFinder
Dusal.0029s00017.1 33203768 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.23 OrthoFinder
EOD29298 No alias Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.21 OrthoFinder
EOD40079 No alias Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal... 0.04 OrthoFinder
OT_15G01250.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.25 OrthoFinder
PTI_01G05820.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.27 OrthoFinder
Sro872_g213940.1 Contig2262.g18776 60S ribosomal protein L5 0.4 OrthoFinder
SymbC1.scaffold1162.12 1162.12 Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.07 OrthoFinder
SymbC1.scaffold8671.2 8671.2 Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.03 OrthoFinder
TP18G00890.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.19 OrthoFinder
Transcript_contig_79973 79973 Ribosomal protein L5 eukaryotic/L18 archaeal [Interproscan]. 0.05 OrthoFinder
Vocar.0004s0107.1 32889418 Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.09 OrthoFinder
XM_002501895.1 MICPUN_108173, 108173 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.32 OrthoFinder
XM_003057549.1 MicpuC2_49536, 49536 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.15 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05536.1_13 HaLaN_00015, GFH05536 Ribosomal_L18_c domain-containing protein 0.14 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20400.1_5627 PRW20400 60S ribosomal L5 0.09 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495592.1_1590 KAA8495592 60S ribosomal protein L5 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 14 176
IPR025607 Rbsml_L5e/L18P_C 193 284
No external refs found!