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  5. XM_003063748.1

XM_003063748.1 (MicpuC2_42955, 42955)


Aliases : MicpuC2_42955, 42955

Description : HELP; WD40 repeat [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063748.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.02 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.01 OrthoFinder
Cre10.g436000 30790221 No description available 0.02 OrthoFinder
Cz01g41170.t1 No alias WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.02 OrthoFinder
Dusal.0100s00010.1 33202474 Hypothetical protein 0.02 OrthoFinder
Dusal.0177s00014.1 33189755 WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0017.1 32896445 WD40 repeat; HELP; Anaphase-promoting complex subunit 4,... 0.02 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002499921.1 MICPUN_99060, 99060 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002501695.1 MICPUN_100032, 100032 HELP; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002504527.1 MICPUN_61281, 61281 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002505973.1 MICPUN_64185, 64185 Anaphase-promoting complex subunit 4, WD40 domain [Interproscan]. 0.03 OrthoFinder
XM_002508893.1 MICPUN_52616, 52616 Hypothetical protein 0.02 OrthoFinder
XM_003059760.1 MicpuC2_18351, 18351 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001273.1_cds_GFH18259.1_12736 HaLaN_15032, GFH18259 Lipoxygenase y domain-containing protein 1 0.01 OrthoFinder
lcl|BLLF01007604.1_cds_GFH33025.1_27502 HaLaN_32336, GFH33025 WD_REPEATS_REGION domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59716.1_6391 PRW59716 Lipoxygenase homology domain-containing 1 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Enrichment
MF GO:0015020 glucuronosyltransferase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 145 173
IPR001680 WD40_repeat 1142 1174
IPR001680 WD40_repeat 1389 1424
IPR001680 WD40_repeat 722 756
IPR001680 WD40_repeat 1230 1263
IPR001680 WD40_repeat 345 372
IPR001680 WD40_repeat 1507 1542
IPR005108 HELP 76 139
IPR005108 HELP 869 935
No external refs found!