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  5. XM_003063695.1

XM_003063695.1 (MicpuC2_53713, 53713)


Aliases : MicpuC2_53713, 53713

Description : Sel1-like repeat [Interproscan].


Gene families : OG_01_0000979 (OrthoFinder) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063695.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
XM_003057704.1 MicpuC2_57277, 57277 Hypothetical protein 0.07 OrthoFinder
XM_003058151.1 MicpuC2_7727, 7727 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003060202.1 MicpuC2_59836, 59836 Sel1-like repeat; F-box domain [Interproscan]. 0.06 OrthoFinder
XM_003060228.1 MicpuC2_59890, 59890 Hypothetical protein 0.04 OrthoFinder
XM_003060245.1 MicpuC2_59930, 59930 Hypothetical protein 0.06 OrthoFinder
XM_003060318.1 MicpuC2_60089, 60089 Hypothetical protein 0.06 OrthoFinder
XM_003060531.1 MicpuC2_7648, 7648 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 259 276
IPR006597 Sel1-like 242 257
IPR006597 Sel1-like 195 225
IPR006597 Sel1-like 174 188
No external refs found!