- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MicpuC2_2206, 2206
Description : RIO1 family [Interproscan].
Gene families : OG_01_0003136 (OrthoFinder) Phylogenetic Tree(s): OG0003136_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003063692.1 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000980.6 | tig00000980_g6131.t1 | Protein modification.phosphorylation.atypical kinase... | 0.02 | OrthoFinder | |
| EOD28399 | No alias | RIO1 family [Interproscan]. | 0.05 | OrthoFinder | |
| OT_14G00330.1 | No alias | RIO1 family [Interproscan]. | 0.09 | OrthoFinder | |
| PTI_27G00620.1 | No alias | RIO1 family [Interproscan]. | 0.08 | OrthoFinder | |
| Sro1412_g270480.1 | Contig422.g5668 | Protein kinase RIO1 | 0.06 | OrthoFinder | |
| TP02G00750.1 | No alias | RIO1 family [Interproscan]. | 0.05 | OrthoFinder | |
| XM_002505575.1 | MICPUN_67735, 67735 | RIO1 family [Interproscan]. | 0.06 | OrthoFinder | |
| lcl|LHPG02000005.1_cds_PRW58527.1_7750 | PRW58527 | Serine threonine-kinase RIO1-like | 0.12 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
| MF | GO:0004408 | holocytochrome-c synthase activity | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005739 | mitochondrion | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006415 | translational termination | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |