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  5. XM_003063687.1

XM_003063687.1 (MicpuC2_3609, 3609)


Aliases : MicpuC2_3609, 3609

Description : Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan].


Gene families : OG_01_0001270 (OrthoFinder) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063687.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cre03.g152950 30787527 RNA processing.RNA... 0.03 OrthoFinder
Cre16.g691900 30776864 RNA processing.RNA... 0.07 OrthoFinder
Cz11g12070.t1 No alias Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.03 OrthoFinder
Dusal.0448s00005.1 33185729 Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.02 OrthoFinder
OT_16G02630.1 No alias Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.02 OrthoFinder
PTI_11G00610.1 No alias Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_57035 57035 Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_60339 60339 Hypothetical protein 0.02 OrthoFinder
Vocar.0019s0103.1 32892839 Hypothetical protein 0.03 OrthoFinder
XM_002506253.1 MICPUN_104259, 104259 Pseudouridine synthase I, TruA, alpha/beta domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005011.1_cds_GFH30598.1_25075 HaLaN_29481, GFH30598 Protein kinase domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 139 242
No external refs found!