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  5. XM_003063673.1

XM_003063673.1 (MicpuC2_65966, 65966)


Aliases : MicpuC2_65966, 65966

Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063673.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001628.6 tig00001628_g9433.t1 No description available 0.02 OrthoFinder
Cre16.g687300 30777804 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder
Cre17.g721700 30782709, CPLD44 Thylakoid lumenal protein TL20.3, chloroplastic... 0.06 OrthoFinder
Cz06g31120.t1 No alias Hypothetical protein 0.05 OrthoFinder
Cz06g31130.t1 No alias Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
Cz07g01040.t1 No alias Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
EOD41761 No alias Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
OT_14G00730.1 No alias Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
Sro352_g124290.1 Contig2645.g21405 Pathogenesis 0.03 OrthoFinder
Sro404_g135940.1 Contig4176.g31854 Thylakoid lumenal 15 kDa protein 0.03 OrthoFinder
TP09G02100.1 No alias Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
Transcript_contig_54693 54693 Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
XM_002505560.1 MICPUN_54755, 54755 Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
XM_002505800.1 MICPUN_72613, 72613 Hypothetical protein 0.03 OrthoFinder
XM_003062880.1 MicpuC2_21938, 21938 Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59735.1_6429 PRW59735 Thylakoid lumenal chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 123 149
IPR001646 5peptide_repeat 158 192
No external refs found!