Aliases : MicpuC2_11548, 11548
Description : Ribosomal protein L19 [Interproscan].
Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_003063582.1 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre07.g322500 | 30774415, MRPL19 | No description available | 0.03 | OrthoFinder | |
Cre17.g734450 | 30782167, PRPL19 | 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride | 0.02 | OrthoFinder | |
Dusal.0444s00003.1 | 33192973 | Ribosomal protein L19 [Interproscan]. | 0.03 | OrthoFinder | |
OT_14G02200.1 | No alias | Ribosomal protein L19 [Interproscan]. | 0.03 | OrthoFinder | |
OT_20G00580.1 | No alias | Ribosomal protein L19 [Interproscan]. | 0.09 | OrthoFinder | |
Sro79_g042660.1 | Contig1826.g16073 | Protein L19 | 0.03 | OrthoFinder | |
lcl|BLLF01000249.1_cds_GFH09633.1_4110 | HaLaN_04811, GFH09633 | 50S ribosomal protein L19, chloroplastic | 0.02 | OrthoFinder | |
lcl|LHPG02000009.1_cds_PRW56055.1_10000 | PRW56055 | 50S ribosomal L19-chloroplastic | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Enrichment |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Enrichment |
MF | GO:0005047 | signal recognition particle binding | IEP | Enrichment |
MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Enrichment |
BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
MF | GO:0008146 | sulfotransferase activity | IEP | Enrichment |
MF | GO:0008184 | glycogen phosphorylase activity | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
MF | GO:0042277 | peptide binding | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Enrichment |
BP | GO:0044093 | positive regulation of molecular function | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:0110154 | RNA decapping | IEP | Enrichment |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001857 | Ribosomal_L19 | 37 | 126 |
No external refs found! |