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  5. XM_003063581.1

XM_003063581.1 (MicpuC2_36568, 36568)


Aliases : MicpuC2_36568, 36568

Description : LSM domain, eukaryotic/archaea-type [Interproscan].


Gene families : OG_01_0004585 (OrthoFinder) Phylogenetic Tree(s): OG0004585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063581.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662300 30777721 RNA processing.RNA splicing.U6-associated LSm accessory... 0.03 OrthoFinder
OT_14G00370.1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder
PTI_28G00710.1 No alias LSM domain, eukaryotic/archaea-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005740 mitochondrial envelope IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0031967 organelle envelope IEP Enrichment
CC GO:0031975 envelope IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
CC GO:0045277 respiratory chain complex IV IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 15 91
No external refs found!