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  5. XM_003063550.1

XM_003063550.1 (MicpuC2_9123, 9123)


Aliases : MicpuC2_9123, 9123

Description : Ribosomal protein L19 [Interproscan].


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063550.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322500 30774415, MRPL19 No description available 0.05 OrthoFinder
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.08 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.06 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.05 OrthoFinder
OT_14G02200.1 No alias Ribosomal protein L19 [Interproscan]. 0.04 OrthoFinder
OT_20G00580.1 No alias Ribosomal protein L19 [Interproscan]. 0.16 OrthoFinder
Sro79_g042660.1 Contig1826.g16073 Protein L19 0.01 OrthoFinder
TPCG00110.1 No alias Ribosomal protein L19 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_86755 86755 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56055.1_10000 PRW56055 50S ribosomal L19-chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005622 intracellular anatomical structure IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
CC GO:0009579 thylakoid IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 1 102
No external refs found!