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  5. XM_003063506.1

XM_003063506.1 (MicpuC2_36482, 36482)


Aliases : MicpuC2_36482, 36482

Description : Photosystem I subunit II, chloroplast precursor (PSAD)


Gene families : OG_01_0004436 (OrthoFinder) Phylogenetic Tree(s): OG0004436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063506.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre05.g238332 30782977, PSAD Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.09 OrthoFinder
Cz05g36030.t1 No alias Photosystem I PsaD [Interproscan]. 0.08 OrthoFinder
Dusal.0011s00005.1 33192202 Photosystem I PsaD [Interproscan]. 0.03 OrthoFinder
OT_15G02840.1 No alias Photosystem I PsaD [Interproscan]. 0.08 OrthoFinder
Transcript_contig_59166 59166 Photosystem I PsaD [Interproscan]. 0.01 OrthoFinder
Vocar.0017s0129.1 32891320 Photosystem I PsaD [Interproscan]. 0.06 OrthoFinder
XM_002504606.1 MICPUN_84657, 84657 Photosystem I subunit II, chloroplast precursor (PSAD) 0.08 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44551.1_2377 PRW44551 Photosystem I reaction center subunit chloroplastic 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003685 PsaD 79 206
No external refs found!