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  5. XM_003063496.1

XM_003063496.1 (MicpuC2_36464, 36464)


Aliases : MicpuC2_36464, 36464

Description : Protein LOW PSII ACCUMULATION 1-like [Interproscan].


Gene families : OG_01_0001058 (OrthoFinder) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063496.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre06.g266900 30780099 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder
Cre10.g430150 30790156 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cz01g20260.t1 No alias Protein LOW PSII ACCUMULATION 1-like; Tetratricopeptide... 0.03 OrthoFinder
OT_11G02340.1 No alias Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.04 OrthoFinder
Sro652_g181730.1 Contig2024.g17326 Protein of unknown function (DUF3493) 0.02 OrthoFinder
Sro73_g040520.1 Contig3929.g30153 Protein of unknown function (DUF3493) 0.03 OrthoFinder
Vocar.0005s0262.1 32883657 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.02 OrthoFinder
XM_002509192.1 MICPUN_103517, 103517 Protein LOW PSII ACCUMULATION 1-like [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR021883 LPA1-like 89 165
No external refs found!