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  5. XM_003063328.1

XM_003063328.1 (MicpuC2_52944, 52944)


Aliases : MicpuC2_52944, 52944

Description : SBP domain [Interproscan].


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063328.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cre07.g345050 30775147 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder
Cz07g32220.t1 No alias SBP domain [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0178.1 32895527 Hypothetical protein 0.02 OrthoFinder
Vocar.0042s0081.1 32892040 SBP domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05936.1_5959 PRW05936 Squamosa promoter binding 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 173 246
No external refs found!