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  5. XM_003063288.1

XM_003063288.1 (MicpuC2_53278, 53278)


Aliases : MicpuC2_53278, 53278

Description : EF-hand domain; EF-hand domain pair; Sterile alpha motif domain [Interproscan].


Gene families : OG_01_0002249 (OrthoFinder) Phylogenetic Tree(s): OG0002249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063288.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
XM_002504922.1 MICPUN_62605, 62605 ChlRe radial spoke protein 7-like protein 0.03 OrthoFinder
XM_002505226.1 MICPUN_86323, 86323 Radial spoke protein 7 (RSP7) 0.04 OrthoFinder
XM_002506425.1 MICPUN_104251, 104251 EF-hand domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001660 SAM 338 402
IPR002048 EF_hand_dom 760 779
IPR002048 EF_hand_dom 563 620
IPR002048 EF_hand_dom 446 504
No external refs found!