Cpa|evm.model.tig00000194.42 (tig00000194_g14770.t1)


Aliases : tig00000194_g14770.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase


Gene families : OG_01_0000912 (OrthoFinder) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.42
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Cre07.g340050 30774278 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cre12.g533050 30793617 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz05g00180.t1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.05 OrthoFinder
Cz09g14040.t1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.04 OrthoFinder
Dusal.2360s00001.1 33203466 GTP binding domain [Interproscan]. 0.03 OrthoFinder
EOD36669 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
OT_06G01820.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.02 OrthoFinder
OT_08G02180.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.05 OrthoFinder
PTI_02G00050.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.06 OrthoFinder
PTI_02G04110.1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.06 OrthoFinder
Sro447_g144970.1 Contig3064.g24419 Nucleolar GTP-binding protein 2 0.06 OrthoFinder
Sro93_g048510.1 Contig3841.g29539 Nucleotide-binding protein-like 3 0.02 OrthoFinder
TP06G02390.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.04 OrthoFinder
TP06G07600.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.06 OrthoFinder
Transcript_contig_57852 57852 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.04 OrthoFinder
Transcript_contig_78386 78386 GTP binding domain; Guanine nucleotide-binding... 0.03 OrthoFinder
Vocar.0005s0026.1 32884003 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
Vocar.0017s0021.1 32891426 Guanine nucleotide-binding protein-like 3, N-terminal... 0.02 OrthoFinder
XM_002501324.1 MICPUN_81269, 81269 GTP binding domain; Nucleolar GTP-binding protein 2,... 0.06 OrthoFinder
XM_002507224.1 MICPUN_93149, 93149 Guanine nucleotide-binding protein-like 3, N-terminal... 0.03 OrthoFinder
XM_003058871.1 MicpuC2_16708, 16708 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.1 OrthoFinder
lcl|BLLF01002214.1_cds_GFH23199.1_17676 HaLaN_20779, GFH23199 Nuclear/nucleolar GTPase 2 0.02 OrthoFinder
lcl|BLLF01004585.1_cds_GFH29897.1_24374 HaLaN_28643, GFH29897 CP-type G domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57278.1_8889 PRW57278 Nucleolar GTP-binding 2 0.03 OrthoFinder
lcl|LHPG02000020.1_cds_PRW20978.1_4855 PRW20978 Guanine nucleotide-binding-like NSN1 0.06 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495697.1_1695 KAA8495697 Guanine nucleotide-binding protein-like NSN1 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 306 390
IPR012971 NOG2_N_dom 41 168
No external refs found!