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  5. XM_003062980.1

XM_003062980.1 (MicpuC2_44858, 44858)


Aliases : MicpuC2_44858, 44858

Description : Pescadillo; BRCT domain [Interproscan].


Gene families : OG_01_0002850 (OrthoFinder) Phylogenetic Tree(s): OG0002850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062980.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.62 tig00020961_g16684.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cre16.g683793 30777184 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz07g04070.t1 No alias Pescadillo [Interproscan]. 0.08 OrthoFinder
Dusal.0374s00011.1 33192015 Pescadillo [Interproscan]. 0.06 OrthoFinder
EOD20302 No alias Pescadillo [Interproscan]. 0.03 OrthoFinder
EOD41602 No alias Pescadillo [Interproscan]. 0.08 OrthoFinder
OT_01G06050.1 No alias Pescadillo; BRCT domain [Interproscan]. 0.12 OrthoFinder
PTI_13G00670.1 No alias Pescadillo [Interproscan]. 0.08 OrthoFinder
Sro810_g205800.1 Contig3420.g26658 Pescadillo homolog 0.15 OrthoFinder
TP06G07510.1 No alias Pescadillo; BRCT domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_192 192 Pescadillo [Interproscan]. 0.06 OrthoFinder
Vocar.0023s0027.1 32883220 Pescadillo [Interproscan]. 0.04 OrthoFinder
XM_002508693.1 MICPUN_66594, 66594 Pescadillo [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01009235.1_cds_GFH33660.1_28137 HaLaN_33062, GFH33660 Pescadillo homolog 0.04 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18309.1_5807 PRW18309 Pescadillo-family BRCT domain-containing 0.11 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495748.1_1746 KAA8495748 Pescadillo-like 0.09 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR010613 PES 20 269
IPR001357 BRCT_dom 295 381
No external refs found!