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  5. XM_003062908.1

XM_003062908.1 (MicpuC2_52451, 52451)


Aliases : MicpuC2_52451, 52451

Description : Protein-only RNase P, C-terminal; Pentacotripeptide-repeat region of PRORP [Interproscan].


Gene families : OG_01_0001305 (OrthoFinder) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062908.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cre13.g563850 30784255 RNA processing.ribonuclease activities.RNase P... 0.07 OrthoFinder
Cz09g24050.t1 No alias Protein-only RNase P, C-terminal;... 0.03 OrthoFinder
EOD25521 No alias Protein-only RNase P, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_01G05160.1 No alias Pentacotripeptide-repeat region of PRORP; Protein-only... 0.11 OrthoFinder
Sro23_g015820.1 Contig2259.g18732 Protein-only RNase P, C-terminal [Interproscan]. 0.01 OrthoFinder
Sro2447_g327980.1 Contig3072.g24490 Pentacotripeptide-repeat region of PRORP; Protein-only... 0.02 OrthoFinder
Vocar.0028s0062.1 32895630 Pentacotripeptide-repeat region of PRORP; Protein-only... 0.04 OrthoFinder
XM_002508341.1 MICPUN_102553, 102553 Protein-only RNase P, C-terminal;... 0.09 OrthoFinder
lcl|BLLF01002505.1_cds_GFH24331.1_18808 HaLaN_22105, GFH24331 PRORP domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR031595 PRORP_C 577 682
IPR033443 PPR_long 207 277
No external refs found!