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  5. XM_003062880.1

XM_003062880.1 (MicpuC2_21938, 21938)


Aliases : MicpuC2_21938, 21938

Description : Pentapeptide repeat [Interproscan].


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062880.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre16.g687300 30777804 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder
Cre17.g721700 30782709, CPLD44 Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder
OT_20G00280.1 No alias Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
Sro404_g135940.1 Contig4176.g31854 Thylakoid lumenal 15 kDa protein 0.03 OrthoFinder
Transcript_contig_59683 59683 Hypothetical protein 0.02 OrthoFinder
XM_002505800.1 MICPUN_72613, 72613 Hypothetical protein 0.02 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492529.1_9222 KAA8492529 Thylakoid lumenal 15 kDa protein 1, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 24 56
IPR001646 5peptide_repeat 64 101
No external refs found!