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  5. XM_003062733.1

XM_003062733.1 (MicpuC2_42406, 42406)


Aliases : MicpuC2_42406, 42406

Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062733.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
Cz09g14190.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Cz09g20160.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
EOD08802 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
EOD22353 No alias E3 ubiquitin ligase [Ensembl]. 0.02 OrthoFinder
PTI_27G00520.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1245.1 32885949 Ankyrin repeat-containing domain; Regulator of... 0.03 OrthoFinder
XM_002508379.1 MICPUN_69279, 69279 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 356 407
IPR000408 Reg_chr_condens 465 513
IPR000408 Reg_chr_condens 827 857
IPR000408 Reg_chr_condens 776 824
IPR000408 Reg_chr_condens 410 461
IPR000408 Reg_chr_condens 517 576
No external refs found!