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  5. XM_003062692.1

XM_003062692.1 (MicpuC2_21357, 21357)


Aliases : MicpuC2_21357, 21357

Description : Sel1-like repeat [Interproscan].


Gene families : OG_01_0001732 (OrthoFinder) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062692.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
XM_003056927.1 MicpuC2_15076, 15076 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003057988.1 MicpuC2_57097, 57097 Sel1-like repeat; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
XM_003058333.1 MicpuC2_57814, 57814 Sel1-like repeat; Zinc finger, MYND-type [Interproscan]. 0.06 OrthoFinder
XM_003060235.1 MicpuC2_19323, 19323 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003060485.1 MicpuC2_59811, 59811 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003060487.1 MicpuC2_59818, 59818 Sel1-like repeat; Zinc finger, MYND-type [Interproscan]. 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 65 90
IPR006597 Sel1-like 161 195
IPR006597 Sel1-like 23 58
IPR006597 Sel1-like 144 158
IPR006597 Sel1-like 92 126
No external refs found!