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  5. XM_003062638.1

XM_003062638.1 (MicpuC2_7563, 7563)


Aliases : MicpuC2_7563, 7563

Description : Ribosomal protein L13 [Interproscan].


Gene families : OG_01_0000958 (OrthoFinder) Phylogenetic Tree(s): OG0000958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062638.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cre09.g405200 30781496, MRPL13 Protein biosynthesis.organelle translation... 0.03 OrthoFinder
EOD32274 No alias Mitochondrial/chloroplast ribosomal protein L13 [Ensembl]. 0.02 OrthoFinder
EOD37780 No alias Mitochondrial/chloroplast ribosomal protein L13 [Ensembl]. 0.02 OrthoFinder
OT_06G01030.1 No alias Ribosomal protein L13 [Interproscan]. 0.05 OrthoFinder
Sro874_g214140.1 Contig589.g7365 Protein L13 0.03 OrthoFinder
TPCG02710.1 No alias Ribosomal protein L13 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_3807 3807 Ribosomal protein L13 [Interproscan]. 0.01 OrthoFinder
XM_002501391.1 MICPUN_97280, 97280 Ribosomal protein L13 [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 1 41
No external refs found!