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  5. XM_003062633.1

XM_003062633.1 (MicpuC2_4590, 4590)


Aliases : MicpuC2_4590, 4590

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000109 (OrthoFinder) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062633.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.33 tig00000042_g15425.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000042.34 tig00000042_g15425.t1 Calpain-type cysteine protease DEK1 OS=Zea mays 0.02 OrthoFinder
Cpa|evm.model.tig00000367.43 tig00000367_g24481.t1 No description available 0.02 OrthoFinder
Cre03.g178100 30787264 No description available 0.03 OrthoFinder
Cre06.g303400 30779939, FAP16 No description available 0.02 OrthoFinder
Cre10.g436000 30790221 No description available 0.04 OrthoFinder
Cz01g41160.t1 No alias WD40 repeat; HELP [Interproscan]. 0.02 OrthoFinder
Cz05g14030.t1 No alias HELP; Anaphase-promoting complex subunit 4, WD40 domain;... 0.02 OrthoFinder
Cz11g19130.t1 No alias WD40 repeat; Anaphase-promoting complex subunit 4, WD40... 0.02 OrthoFinder
Dusal.0100s00008.1 33202476 HELP [Interproscan]. 0.02 OrthoFinder
Dusal.0100s00010.1 33202474 Hypothetical protein 0.02 OrthoFinder
Dusal.0177s00014.1 33189755 WD40 repeat; PLAT/LH2 domain [Interproscan]. 0.02 OrthoFinder
Dusal.0177s00015.1 33189759 HELP [Interproscan]. 0.01 OrthoFinder
EOD39577 No alias HELP [Interproscan]. 0.03 OrthoFinder
Vocar.0029s0133.1 32887586 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002501037.1 MICPUN_93773, 93773 HELP; WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002502455.1 MICPUN_58565, 58565 HELP; PLAT/LH2 domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002504527.1 MICPUN_61281, 61281 HELP; WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_002505709.1 MICPUN_63623, 63623 HELP; WD40 repeat; Anaphase-promoting complex subunit 4,... 0.03 OrthoFinder
XM_002505973.1 MICPUN_64185, 64185 Anaphase-promoting complex subunit 4, WD40 domain [Interproscan]. 0.03 OrthoFinder
XM_002508893.1 MICPUN_52616, 52616 Hypothetical protein 0.03 OrthoFinder
XM_003056890.1 MicpuC2_56546, 56546 PLAT/LH2 domain; HELP [Interproscan]. 0.03 OrthoFinder
XM_003057081.1 MicpuC2_38550, 38550 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001273.1_cds_GFH18259.1_12736 HaLaN_15032, GFH18259 Lipoxygenase y domain-containing protein 1 0.01 OrthoFinder
lcl|BLLF01007604.1_cds_GFH33025.1_27502 HaLaN_32336, GFH33025 WD_REPEATS_REGION domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59716.1_6391 PRW59716 Lipoxygenase homology domain-containing 1 isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 132 163
IPR001680 WD40_repeat 17 52
No external refs found!