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Aliases : MicpuC2_52284, 52284
Description : Rab-GTPase-TBC domain [Interproscan].
Gene families : OG_01_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003062621.1 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dusal.0377s00017.1 | 33195257 | Rab-GTPase-TBC domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD14984 | No alias | Rab-GTPase-TBC domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_07G03630.1 | No alias | Rab-GTPase-TBC domain [Interproscan]. | 0.02 | OrthoFinder | |
| SymbC1.scaffold590.6 | 590.6 | Rab-GTPase-TBC domain; Apyrase [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002501648.1 | MICPUN_80830, 80830 | Rab-GTPase-TBC domain [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|BLLF01000529.1_cds_GFH12686.1_7163 | HaLaN_08416, GFH12686 | TBC-domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Enrichment |
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Enrichment |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
| MF | GO:0004334 | fumarylacetoacetase activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0016485 | protein processing | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| MF | GO:0016805 | dipeptidase activity | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Enrichment |
| MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Enrichment |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| MF | GO:0120227 | acyl-CoA binding | IEP | Enrichment |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000195 | Rab-GTPase-TBC_dom | 52 | 252 |
| No external refs found! |