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  5. XM_003062494.1

XM_003062494.1 (MicpuC2_45869, 45869)


Aliases : MicpuC2_45869, 45869

Description : Cullin protein, neddylation domain; Cullin, N-terminal [Interproscan].


Gene families : OG_01_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062494.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.110 tig00000157_g9709.t1 Cullin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020563.190 tig00020563_g11392.t1 Cullin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020563.191 tig00020563_g11392.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00020934.33 tig00020934_g16100.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre07.g324050 30775299, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre17.g734400 30781960, CUL3 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder
Cz01g09050.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Cz09g29020.t1 No alias Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
EOD14996 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.02 OrthoFinder
EOD28450 No alias Cullin, N-terminal; Cullin protein, neddylation domain... 0.03 OrthoFinder
Sro1486_g276660.1 Contig1746.g15552 Cullin-3 0.02 OrthoFinder
Transcript_contig_54372 54372 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Transcript_contig_54536 54536 Cullin protein, neddylation domain; Cullin, N-terminal... 0.02 OrthoFinder
Vocar.0006s0031.1 32894100 Cullin protein, neddylation domain; Cullin, N-terminal... 0.03 OrthoFinder
XM_002501559.1 MICPUN_106836, 106836 Cullin protein, neddylation domain; Cullin, N-terminal... 0.06 OrthoFinder
lcl|BLLF01001017.1_cds_GFH16576.1_11053 HaLaN_13019, GFH16576 CULLIN_2 domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002024.1_cds_GFH22359.1_16836 HaLaN_19814, GFH22359 CULLIN_2 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20903.1_5012 PRW20903 Cullin-1 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 686 748
IPR001373 Cullin_N 14 659
No external refs found!