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  5. XM_003062454.1

XM_003062454.1 (MicpuC2_48630, 48630)


Aliases : MicpuC2_48630, 48630

Description : Alpha tubulin (TUA2)


Gene families : OG_01_0000699 (OrthoFinder) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062454.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.34 tig00000237_g20483.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder
Cpa|evm.model.tig00000404.34 tig00000404_g397.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder
Cre03.g190950 30788226, TUA1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder
Cre04.g216850 30791599, TUA2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder
EOD38024 No alias Alpha-tubulin [Ensembl]. 0.02 OrthoFinder
XM_002506021.1 MICPUN_92378, 92378 Alpha tubulin 1 (TUA1) 0.02 OrthoFinder
lcl|BLLF01000929.1_cds_GFH15979.1_10456 HaLaN_12318, GFH15979 Tubulin alpha chain 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!